New Disease Reports (2016) 34, 1. [http://dx.doi.org/10.5197/j.2044-0588.2016.034.001] Get pdf (836 KB)

First report of Viola white distortion associated virus in Viola tricolor in the United Kingdom

A. Fox 1*, V. Harju 1, A. Skelton 1, L. Jackson 1, A. Buxton-Kirk 1, S. Forde 1, J. England 2, M. Lazenby 3, F. Suarez-Martinez 3 and I. Adams 1

1 Fera Science Ltd, NAFIC, Sand Hutton, York, UK, YO41 1LZ
2 ADAS UK Ltd, Battlegate Road, Boxworth, Cambridge, UK, CB23 4NN
3 Animal and Plant Health Agency, NAFIC, Sand Hutton, York, UK, YO41 1LZ

*adrian.fox@fera.co.uk

Received: 10 May 2016; Published: 19 Jul 2016

In February 2014 a sample of Viola tricolor ssp. tricolor was submitted to Fera from outdoor bedding plants grown in Yorkshire, UK. The sample was sent in following the appearance of symptoms including bleaching and distortion (Fig. 1). The sample was tested by ELISA for Cucumber mosaic virus (CMV) and with generic antisera for the presence of potyviruses.  The sample was negative in each case. In October 2014 a further Viola sample was submitted from a grower in Wiltshire, UK, with up to 10% of the stock affected by similar symptoms. Again, the results of ELISA testing for CMV and potyviruses were negative. Samples were screened using an Illumina MiSeq as described by Adams et al. (2014).  The tripartite genome (GenBank Accession Nos. RNA1-KX196166, RNA2-KX196165, RNA3-KX196164) of a putative sub-group 4 ilarvirus was recovered from the samples having 96% similarity to Viola white distortion associated virus (VWDaV) (GU168941; Fig. 2). To confirm the presence of the virus in the samples a real-time PCR assay was designed (F: 5′-AAGGGAAGAAAGCGAAGACTGTT-3′, R: 5′-TCACAGAGTGATCAACCAATCGT-3′, probe: 5′ Fam-TAGAGATGCCAAACCCGTAACTAAAACG-BHQ1 3′) from consensus sequences from this study and the sequences described by Cuiffo et al. (2014). In each case the samples were positive for the presence of VWDaV. 

Cuiffo et al. (2014) associated the presence of VWDaV with symptoms consistent with pansy mottle syndrome, a disorder recognised since the 1960’s.  To investigate this link, during the summer of 2015, samples were collected from nurseries across England (West Sussex, Hertfordshire and East Yorkshire) which had pansy plants exhibiting bleaching and/or distortion.  Samples of asymptomatic pansies from the same cultivars were also submitted as a ‘healthy control’.  Between 63.5-73.3% of the 300 pansies tested from affected cultivars were positive for VWDaV with no clear correlation to observable symptom or geographic origin.  This report supports the conclusions from Cuiffo et al. (2014) that the virus is probably disseminated widely in germplasm of Viola spp. 

Figure1
Figure 1: Pansy (Viola tricolor ssp. tricolor) exhibiting symptoms of bleaching and distortion.
Figure2
Figure 2: Neighbour joining tree of coat proteins of representative examples of viruses in the family Bromoviridae. The tree was generated in Mega 6 using a maximum composite likelihood model with 500 replicates.

Acknowledgements

Initial sample testing was supported by the Defra-Fera Long Term Service Agreement.  Sample collection, testing and data analysis of the follow up surveillance work was supported through AHDB-Horticulture project PO 016a ‘The role of environmental factors in the incidence of pansy mottle syndrome’.


References

  1. Adams IP,  Skelton A, Macarthur R, Hodges T, Hinds H, Flint L, Nath PD, Boonham N, Fox A, 2014. Carrot yellow leaf virus is associated with carrot internal necrosis. PLoS ONE 9: e109125. [http://dx.doi.org/10.1371/journal.pone.0109125]
  2. Ciuffo M, Pacifico D, Margaria P, Turina M, 2014. A new ilarvirus isolated from Viola × wittrockiana and its detection in pansy germplasm by qRT-PCR. Archives of Virology 159, 561-565. [http://dx.doi.org/10.1007/s00705-013-1837-x]
To cite this report: Fox A, Harju V, Skelton A, Jackson L, Buxton-Kirk A, Forde S, England J, Lazenby M, Suarez-Martinez F, Adams I, 2016. First report of Viola white distortion associated virus in Viola tricolor in the United Kingdom. New Disease Reports 34, 1. [http://dx.doi.org/10.5197/j.2044-0588.2016.034.001]

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